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Gene-associated markers provide tools for tackling illegal fishing and false eco-certification ArchiMer
Nielsen, Einar E.; Cariani, Alessia; Mac Aoidh, Eoin; Maes, Gregory E.; Milano, Ilaria; Ogden, Rob; Taylor, Martin; Hemmer-hansen, Jakob; Babbucci, Massimiliano; Bargelloni, Luca; Bekkevold, Dorte; Diopere, Eveline; Grenfell, Leonie; Helyar, Sarah; Limborg, Morten T.; Martinsohn, Jann T.; Mcewing, Ross; Panitz, Frank; Patarnello, Tomaso; Tinti, Fausto; Van Houdt, Jeroen K. J.; Volckaert, Filip A. M.; Waples, Robin S.; Carvalho, Gary; Albin, Jan Ej; Vieites Baptista, Juan M; Barmintsev, Vladimir; Bautista, Jose M.; Bendixen, Christian; Berge, Jean-pascal; Blohm, Dietmar; Cardazzo, Barbara; Diez, Amalia; Espineira, Montserrat; Geffen, Audrey J.; Gonzalez, Elena; Gonzalez-lavin, Nerea; Guaniero, Ilaria; Jerome, Marc; Kochzius, Marc; Krey, Grigorius; Mouchel, Olivier; Negrisolo, Enrico; Piccinetti, Corrado; Puyet, Antonio; Rastorguev, Sergey; Smith, Jane P; Trentini, Massimo; Verrez-bagnis, Veronique; Volkov, Alexander; Zanzi, Antonella.
Illegal, Unreported and Unregulated fishing has had a major role in the overexploitation of global fish populations. In response, international regulations have been imposed and many fisheries have been 'eco-certified' by consumer organizations, but methods for independent control of catch certificates and eco-labels are urgently needed. Here we show that, by using gene-associated single nucleotide polymorphisms, individual marine fish can be assigned back to population of origin with unprecedented high levels of precision. By applying high differentiation single nucleotide polymorphism assays, in four commercial marine fish, on a pan-European scale, we find 93-100% of individuals could be correctly assigned to origin in policy-driven case studies. We show...
Tipo: Text
Ano: 2012 URL: https://archimer.ifremer.fr/doc/00090/20085/17722.pdf
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MEDLEM database, a data collection on large Elasmobranchs in the Mediterranean and Black seas ArchiMer
Mancusi, Cecilia; Baino, Romano; Fortuna, Corina; De Sola, Luis Gil; Morey, Gabriel; Bradai, Mohamed Nejmeddine; Kallianotis, Argyrios; Soldo, Alen; Hemida, Farid; Saad, Adib Ali; Dimech, Mark; Peristeraki, Panagiota; Bariche, Michel; Clò, Simona; De Sabata, Eleonora; Castellano, Laura; Garibaldi, Fulvio; Lanteri, Luca; Tinti, Fausto; Pais, Antonio; Sperone, Emilio; Micarelli, Primo; Poisson, Francois; Sion, Letizia; Carlucci, Roberto; Cebrian-menchero, Daniel; Séret, Bernard; Ferretti, Francesco; El-far, Alaa; Saygu, Ismet; Shakman, Esmail A.; Bartoli, Alex; Guallart, Javier; Damalas, Dimitrios; Megalofonou, Persefoni; Vacchi, Marino; Bottaro, Massimiliano; Notarbartolo Di Sciara, Giuseppe; Follesa, Maria Cristina; Cannas, Rita; Kabasakal, Hakan; Zava, Bruno; Cavlan, Graziella; Jung, Armelle; Abudaya, Mohammed; Kolitari, Jerina; Barash, Adi; Joksimovic, Aleksandar; Marčeta, Bojan; Gonzalez Vilas, Luis; Tiralongo, Francesco; Giovos, Ioannis; Bargnesi, Filippo; Lelli, Stefano; Barone, Monica; Moro, Stefano; Mazzoldi, Carlotta; Charis, Charilaou; Abella, Alvaro Juan; Serena, Fabrizio; Colloca, Francesco; Cetkovic, Ilija.
The Mediterranean Large Elasmobranchs Monitoring (MEDLEM) database contains over 3000 records (more than 4000 individuals) of large elasmobranch species from 20 different countries around the Mediterranean and Black seas, observed from 1666 to 2017. The main species included in the archive are the devil fish (1 813 individuals), the basking shark (939 individuals), the blue shark (585 individuals) and the great white shark (337 individuals). In the last decades other species such as the shortfin mako (166 individuals), the spiny butterfly ray (138) and the thresher shark (174 individuals) were reported with an increasing frequency. This was possibly due to an increased public awareness on the conservation status of sharks, and a consequent development of...
Tipo: Text Palavras-chave: Bycatch; Databases; Geographical distribution; Large elasinobranchs; Mediterranean and Black seas; Sharks.
Ano: 2020 URL: https://archimer.ifremer.fr/doc/00649/76117/77080.pdf
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Otolith shape variation provides a marker of stock origin for north Atlantic bluefin tuna (Thunnus thynnus) ArchiMer
Brophy, Deirdre; Haynes, Paula; Arrizabalaga, Haritz; Fraile, Igaratza; Fromentin, Jean-marc; Garibaldi, Fulvio; Katavic, Ivan; Tinti, Fausto; Karakulak, F. Saadet; Macias, David; Busawon, Dheeraj; Hanke, Alex; Kimoto, Ai; Sakai, Osamu; Deguara, Simeon; Abid, Nouredinne; Santos, Miguel Neves.
Two stocks of bluefin tuna (Thunnus thynnus) inhabit the north Atlantic; the western and eastern stocks spawn in the Gulf of Mexico and the Mediterranean Sea respectively. Trans-Atlantic movements occur outside spawning time whereas natal homing maintains stock structure. Commercial fisheries may exploit a mixed assemblage of both stocks. The incorporation of mixing rates into stock assessment is precluded by uncertainties surrounding stock discrimination. Otolith shape descriptors were used to characterise western and eastern stocks of Atlantic bluefin tuna in the present study and to estimate stock composition in catches of unknown origin. Otolith shape varied with length and between locations and years. Within a restricted size range (200-297-cm fork...
Tipo: Text Palavras-chave: Elliptical Fourier analysis; Population structure; Stock mixture analysis.
Ano: 2016 URL: http://archimer.ifremer.fr/doc/00346/45745/45381.pdf
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Restriction fragment length analysis of the cytochrome b gene and muscle fatty acid composition differentiate the cryptic flatfish species Solea solea and Solea aegyptiaca ArchiMer
Boukouvala, Evridiki; Cariani, Alessia; Maes, Gregory E.; Sevilla, Rafael G.; Verrez-bagnis, Veronique; Jerome, Marc; Guarniero, Ilaria; Monios, Georgios; Tinti, Fausto; Volckaert, Filip A.m.; Bautista, José M.; Krey, Grigorios.
Overlapping external morphometric characters easily confound the flatfishes Solea aegyptiaca and Solea solea (Soleidae) in areas of the Mediterranean Sea where both species live in sympatry. This leads to uncertainties in the fisheries and marketing of the species, in addition to misinterpretations in biogeography and conservation studies. Here we describe a simple restriction fragment length-based diagnostic test, which differentiates S. solea from S. aegyptiaca, as well as from other species of the Soleidae family. Furthermore, we show that the two species living in sympatry in the Gulf of Kavala (North Aegean Sea, Greece) present significant qualitative differences in muscle fatty acid composition, a property which can also be used to distinguish the...
Tipo: Text Palavras-chave: Solea solea; Solea aegyptiaca; Species diagnosis; Cytochrome b gene; EcoR V restriction fragment length; White muscle fatty acid composition.
Ano: 2012 URL: http://archimer.ifremer.fr/doc/00088/19974/17641.pdf
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The population genomics of yellowfin tuna (Thunnus albacares) at global geographic scale challenges current stock delineation ArchiMer
Pecoraro, Carlo; Babbucci, Massimiliano; Franch, Rafaella; Rico, Ciro; Papetti, Chiara; Chassot, Emmanuel; Bodin, Nathalie; Cariani, Alessia; Bargelloni, Luca; Tinti, Fausto.
Yellowfin tuna, Thunnus albacares, is one of the most important seafood commodities in the world. Despite its great biological and economic importance, conflicting evidence arises from classical genetic and tagging studies concerning the yellowfin tuna population structure at local and global oceanic scales. Access to more powerful and cost effective genetic tools would represent the first step towards resolving the population structure of yellowfin tuna across its distribution range. Using a panel of 939 neutral Single Nucleotide Polymorphisms (SNPs), and the most comprehensive data set of yellowfin samples available so far, we found genetic differentiation among the Atlantic, Indian and Pacific oceans. The genetic stock structure analysis carried out...
Tipo: Text
Ano: 2018 URL: https://archimer.ifremer.fr/doc/00460/57128/75130.pdf
Registros recuperados: 5
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